First it's very important to find out how much structure needs to be maintained.
A first approach could be:
But if also relations between tables has to be "transported" to RDF, this concept has to be implemented in the parser. The first approach would be to point to other entities with the RDF built in predicates. Use rdf:Bag for 1:n and n:m relations.
Another concept which isn't consired in this schema are constraints like unique columns. to implement this, a new vocabulary has to be defined.
For more information see G. Lausen, M. Meier, M. Schmidt: SPARQLing Constraints for RDF in Proceedings of the 11th international conference on Extending database technology: Advances in database technology, 2008, 499-509.