Another solution will be to use a new script called anti-adblock-killer has been developed that allows you to keep your Adblock active when you visit a website equipped with an Adblock detector, and this asks you to deactivate it. The script "tricks" the web, making it believe that you do not have Adblock enabled, and you can access the content without problems and of course without seeing publicity.
By default Adblock does not block all pop ups, but you can extend the blacklist by adding additional filters e.g. Fanboy's annoyances filter list: